Zm00001d048147_T002

Description : syntaxin of plants 61

Gene families : OG_01_0004749 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004749_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d048147_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d048147_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_230
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_252

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	ISM	GOs from InterProScan
BP	GO:0016192	vesicle-mediated transport	ISM	GOs from InterProScan
BP	GO:0048193	Golgi vesicle transport	ISM	GOs from InterProScan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000727	T_SNARE_dom	SMART	155	222
IPR045242	Syntaxin	PANTHER	11	239
IPR000727	T_SNARE_dom	Pfam	197	248
IPR015260	Syntaxin-6_N	Pfam	6	95
IPR000727	T_SNARE_dom	ProSiteProfiles	160	222
IPR010989	SNARE	SUPERFAMILY	5	95
IPR000727	T_SNARE_dom	Pfam	197	248
IPR000727	T_SNARE_dom	SMART	155	222
IPR015260	Syntaxin-6_N	Pfam	6	95
IPR000727	T_SNARE_dom	ProSiteProfiles	160	222
IPR045242	Syntaxin	PANTHER	1	251
IPR010989	SNARE	SUPERFAMILY	5	95

No CAZYmes available for this sequence

External Links

No external refs found!