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  5. Zm00001d048340_T002

Zm00001d048340_T002


Description : DNA-binding bromodomain-containing protein


Gene families : OG_01_0014177 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014177_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d048340_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d048340_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_274
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_247


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001487 Bromodomain SMART 110 218
IPR001487 Bromodomain PRINTS 180 199
IPR001487 Bromodomain PRINTS 146 162
IPR001487 Bromodomain PRINTS 132 145
IPR001487 Bromodomain PRINTS 162 180
IPR001487 Bromodomain ProSiteProfiles 129 199
IPR036427 Bromodomain-like_sf SUPERFAMILY 117 224
IPR018359 Bromodomain_CS ProSitePatterns 135 191
IPR036427 Bromodomain-like_sf Gene3D 116 229
IPR001487 Bromodomain Pfam 122 203
IPR001487 Bromodomain Pfam 124 203
IPR001487 Bromodomain PRINTS 180 199
IPR001487 Bromodomain PRINTS 146 162
IPR001487 Bromodomain PRINTS 132 145
IPR001487 Bromodomain PRINTS 162 180
IPR018359 Bromodomain_CS ProSitePatterns 135 191
IPR036427 Bromodomain-like_sf SUPERFAMILY 117 224
IPR001487 Bromodomain ProSiteProfiles 129 199
IPR036427 Bromodomain-like_sf Gene3D 116 229
IPR001487 Bromodomain SMART 110 218

No CAZYmes available for this sequence

No external refs found!