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  5. Zm00001d048344_T002

Zm00001d048344_T002


Description : expansin-like A1


Gene families : OG_01_0000882 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000882_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d048344_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d048344_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_75
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_37


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007117 Expansin_CBD ProSiteProfiles 169 253
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 48 152
IPR036749 Expansin_CBD_sf SUPERFAMILY 165 252
IPR007117 Expansin_CBD Pfam 170 242
IPR007118 Expan_Lol_pI PRINTS 47 65
IPR007118 Expan_Lol_pI PRINTS 135 151
IPR007118 Expan_Lol_pI PRINTS 69 87
IPR009009 RlpA-like_DPBB Pfam 67 126
IPR036908 RlpA-like_sf SUPERFAMILY 18 150
IPR036749 Expansin_CBD_sf Gene3D 149 258
IPR036908 RlpA-like_sf Gene3D 23 148
IPR007117 Expansin_CBD Pfam 168 242
IPR036908 RlpA-like_sf Gene3D 23 148
IPR007117 Expansin_CBD ProSiteProfiles 169 253
IPR036908 RlpA-like_sf SUPERFAMILY 18 150
IPR036749 Expansin_CBD_sf SUPERFAMILY 165 252
IPR036749 Expansin_CBD_sf Gene3D 149 258
IPR009009 RlpA-like_DPBB Pfam 67 126
IPR007118 Expan_Lol_pI PRINTS 47 65
IPR007118 Expan_Lol_pI PRINTS 135 151
IPR007118 Expan_Lol_pI PRINTS 69 87
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 48 152

No CAZYmes available for this sequence

No external refs found!