Zm00001d048447_T002

Description : HCO3- transporter family

Gene families : OG_01_0001500 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001500_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d048447_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d048447_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_109
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_217

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005452	solute:inorganic anion antiporter activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005543	phospholipid binding	ISM	GOs from InterProScan
MF	GO:0005545	1-phosphatidylinositol binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008289	lipid binding	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015291	secondary active transmembrane transporter activity	None	Extended
MF	GO:0015297	antiporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	ISM	GOs from InterProScan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0030135	coated vesicle	None	Extended
CC	GO:0030136	clathrin-coated vesicle	ISM	GOs from InterProScan
MF	GO:0030276	clathrin binding	ISM	GOs from InterProScan
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
MF	GO:0035091	phosphatidylinositol binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0048268	clathrin coat assembly	ISM	GOs from InterProScan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011417	ANTH_dom	Pfam	4	139
IPR014712	ANTH_dom_sf	Gene3D	72	140
IPR011531	HCO3_transpt-like_TM_dom	Pfam	552	619
IPR011531	HCO3_transpt-like_TM_dom	Pfam	321	438
IPR011531	HCO3_transpt-like_TM_dom	Pfam	146	252
IPR003020	HCO3_transpt_euk	PANTHER	286	621
IPR014712	ANTH_dom_sf	Gene3D	72	140
IPR003020	HCO3_transpt_euk	PANTHER	716	866
IPR003020	HCO3_transpt_euk	PANTHER	98	658
IPR003020	HCO3_transpt_euk	PANTHER	662	719
IPR011531	HCO3_transpt-like_TM_dom	Pfam	146	252
IPR011531	HCO3_transpt-like_TM_dom	Pfam	552	619
IPR011531	HCO3_transpt-like_TM_dom	Pfam	322	437
IPR011417	ANTH_dom	Pfam	3	139

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d048447_T002

Expression Profile

Co-expression Networks

Functional Annotation