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  5. Zm00001d048536_T009

Zm00001d048536_T009


Description : SKP1-like 21


Gene families : OG_01_0002293 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002293_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d048536_T009 No neighbors in network
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d048536_T009
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_251


Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001232 SKP1-like SMART 15 116
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 17 80
IPR016072 Skp1_comp_dimer Pfam 117 154
IPR011333 SKP1/BTB/POZ_sf Gene3D 12 161
IPR016897 SKP1 PANTHER 18 154
IPR036296 SKP1-like_dim_sf SUPERFAMILY 90 160
IPR011333 SKP1/BTB/POZ_sf Gene3D 12 161
IPR016897 SKP1 PANTHER 1 245
IPR001232 SKP1-like SMART 15 116
IPR016072 Skp1_comp_dimer Pfam 117 154
IPR036296 SKP1-like_dim_sf SUPERFAMILY 90 160
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 17 80

No CAZYmes available for this sequence

No external refs found!