Zm00001d048546_T008

Description : transcription regulators

Gene families : OG_01_0000198 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000198_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d048546_T008
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d048546_T008
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_58

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006417	regulation of translation	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0017148	negative regulation of translation	ISM	GOs from InterProScan
BP	GO:0019222	regulation of metabolic process	None	Extended
CC	GO:0030015	CCR4-NOT core complex	ISM	GOs from InterProScan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034248	regulation of amide metabolic process	None	Extended
BP	GO:0034249	negative regulation of amide metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051248	negative regulation of protein metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR032193	CNOT1_TTP_bind	Pfam	652	827
IPR038535	CNOT1_TTP_bind_sf	Gene3D	645	827
IPR032194	CNOT1_HEAT	Pfam	470	615
IPR024557	CNOT1_dom_4	Pfam	1332	1452
IPR032191	CNOT1_CAF1_bind	Pfam	982	1201
IPR040398	Not1	PANTHER	26	2527
IPR007196	CCR4-Not_Not1_C	Pfam	2157	2521
IPR032191	CNOT1_CAF1_bind	Pfam	982	1201
IPR007196	CCR4-Not_Not1_C	Pfam	2149	2522
IPR032194	CNOT1_HEAT	Pfam	470	615
IPR038535	CNOT1_TTP_bind_sf	Gene3D	645	827
IPR032193	CNOT1_TTP_bind	Pfam	652	827
IPR024557	CNOT1_dom_4	Pfam	1332	1452
IPR040398	Not1	PANTHER	1614	1789
IPR040398	Not1	PANTHER	1	1452
IPR040398	Not1	PANTHER	1790	2541

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d048546_T008

Expression Profile

Co-expression Networks

Functional Annotation