1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d048759_T001

Zm00001d048759_T001


Description : laccase 7


Gene families : OG_01_0007444 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007444_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d048759_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d048759_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_209
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_14


Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR033138 Cu_oxidase_CS ProSitePatterns 578 598
IPR008972 Cupredoxin Gene3D 179 380
IPR008972 Cupredoxin SUPERFAMILY 177 377
IPR045087 Cu-oxidase_fam PANTHER 50 612
IPR011706 Cu-oxidase_C Pfam 477 603
IPR008972 Cupredoxin SUPERFAMILY 497 620
IPR008972 Cupredoxin SUPERFAMILY 50 194
IPR002355 Cu_oxidase_Cu_BS ProSitePatterns 583 594
IPR034288 CuRO_1_LCC CDD 52 168
IPR001117 Cu-oxidase_2nd Pfam 182 333
IPR008972 Cupredoxin Gene3D 409 626
IPR011707 Cu-oxidase-like_N Pfam 56 170
IPR034285 CuRO_2_LCC CDD 183 333
IPR008972 Cupredoxin Gene3D 40 168
IPR008972 Cupredoxin SUPERFAMILY 497 620
IPR002355 Cu_oxidase_Cu_BS ProSitePatterns 583 594
IPR011706 Cu-oxidase_C Pfam 490 603
IPR008972 Cupredoxin Gene3D 409 626
IPR011707 Cu-oxidase-like_N Pfam 56 170
IPR033138 Cu_oxidase_CS ProSitePatterns 578 598
IPR008972 Cupredoxin Gene3D 40 168
IPR008972 Cupredoxin SUPERFAMILY 50 194
IPR034285 CuRO_2_LCC CDD 183 333
IPR034288 CuRO_1_LCC CDD 52 168
IPR008972 Cupredoxin Gene3D 179 380
IPR045087 Cu-oxidase_fam PANTHER 23 621
IPR008972 Cupredoxin SUPERFAMILY 177 377
IPR001117 Cu-oxidase_2nd Pfam 183 314
HMM Family HMM Length Query Length e-Value Query Start Query End
AA1 358 638 3e-115 67 594
No external refs found!