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  5. Zm00001d048782_T001

Zm00001d048782_T001


Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein


Gene families : OG_01_0026945 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0026945_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d048782_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d048782_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_36
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_55


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISM GOs from InterProScan
CC GO:0005730 nucleolus ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR018492 Ribosomal_eL8/Nhp2 PRINTS 78 91
IPR018492 Ribosomal_eL8/Nhp2 PRINTS 94 104
IPR018492 Ribosomal_eL8/Nhp2 PRINTS 59 73
IPR002415 H/ACA_rnp_Nhp2-like PRINTS 45 60
IPR002415 H/ACA_rnp_Nhp2-like PRINTS 62 72
IPR002415 H/ACA_rnp_Nhp2-like PRINTS 32 45
IPR029064 Ribosomal_eL30-like_sf SUPERFAMILY 29 102
IPR004038 Ribosomal_eL8/eL30/eS12/Gad45 Pfam 49 101
IPR029064 Ribosomal_eL30-like_sf Gene3D 25 103
IPR002415 H/ACA_rnp_Nhp2-like PRINTS 45 60
IPR002415 H/ACA_rnp_Nhp2-like PRINTS 62 72
IPR002415 H/ACA_rnp_Nhp2-like PRINTS 32 45
IPR018492 Ribosomal_eL8/Nhp2 PRINTS 78 91
IPR018492 Ribosomal_eL8/Nhp2 PRINTS 94 104
IPR018492 Ribosomal_eL8/Nhp2 PRINTS 59 73
IPR029064 Ribosomal_eL30-like_sf SUPERFAMILY 29 102
IPR029064 Ribosomal_eL30-like_sf Gene3D 25 103
IPR004038 Ribosomal_eL8/eL30/eS12/Gad45 Pfam 50 101

No CAZYmes available for this sequence

No external refs found!