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  5. Zm00001d048874_T001

Zm00001d048874_T001


Description : Terpenoid cyclases/Protein prenyltransferases superfamily protein


Gene families : OG_01_0007857 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007857_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d048874_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d048874_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_455
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_297


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding ISM GOs from InterProScan
MF GO:0010333 terpene synthase activity ISM GOs from InterProScan
MF GO:0016829 lyase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036965 Terpene_synth_N_sf Gene3D 38 476
IPR008930 Terpenoid_cyclase/PrenylTrfase SUPERFAMILY 224 448
IPR008949 Isoprenoid_synthase_dom_sf SUPERFAMILY 465 539
IPR008949 Isoprenoid_synthase_dom_sf Gene3D 480 778
IPR001906 Terpene_synth_N Pfam 213 412
IPR008930 Terpenoid_cyclase/PrenylTrfase SUPERFAMILY 51 237
IPR008930 Terpenoid_cyclase/PrenylTrfase SUPERFAMILY 224 448
IPR001906 Terpene_synth_N Pfam 213 423
IPR005630 Terpene_synthase_metal-bd Pfam 469 541
IPR008949 Isoprenoid_synthase_dom_sf SUPERFAMILY 465 539
IPR008949 Isoprenoid_synthase_dom_sf Gene3D 480 778
IPR036965 Terpene_synth_N_sf Gene3D 38 476
IPR008930 Terpenoid_cyclase/PrenylTrfase SUPERFAMILY 51 237

No CAZYmes available for this sequence

No external refs found!