Zm00001d048947_T001

Description : pathogenesis-related 4

Gene families : OG_01_0005741 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005741_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d048947_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d048947_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_144
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_60

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004540	RNA nuclease activity	ISM	GOs from InterProScan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009620	response to fungus	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0042742	defense response to bacterium	ISM	GOs from InterProScan
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050832	defense response to fungus	ISM	GOs from InterProScan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001153	Barwin_dom	PRINTS	67	85
IPR001153	Barwin_dom	PRINTS	86	104
IPR036908	RlpA-like_sf	Gene3D	110	175
IPR036908	RlpA-like_sf	Gene3D	32	105
IPR001153	Barwin_dom	ProSiteProfiles	32	175
IPR036908	RlpA-like_sf	SUPERFAMILY	32	175
IPR044301	PR4	PANTHER	17	175
IPR001153	Barwin_dom	Pfam	34	103
IPR001153	Barwin_dom	ProSiteProfiles	32	175
IPR001153	Barwin_dom	PRINTS	67	85
IPR001153	Barwin_dom	PRINTS	86	104
IPR001153	Barwin_dom	Pfam	34	103
IPR036908	RlpA-like_sf	SUPERFAMILY	32	175
IPR044301	PR4	PANTHER	1	175
IPR036908	RlpA-like_sf	Gene3D	110	175
IPR036908	RlpA-like_sf	Gene3D	32	105

No CAZYmes available for this sequence

External Links

No external refs found!