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  5. Zm00001d049016_T001

Zm00001d049016_T001


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG_01_0001145 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001145_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d049016_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d049016_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_247
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_260


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015915 Kelch-typ_b-propeller Gene3D 294 371
IPR001810 F-box_dom Pfam 18 50
IPR036047 F-box-like_dom_sf SUPERFAMILY 10 55
IPR015915 Kelch-typ_b-propeller SUPERFAMILY 95 359
IPR044595 KMD1-4 PANTHER 14 372
IPR015915 Kelch-typ_b-propeller Gene3D 32 293
IPR006652 Kelch_1 SMART 179 228
IPR006652 Kelch_1 SMART 130 178
IPR006652 Kelch_1 Pfam 167 213
IPR006652 Kelch_1 Pfam 167 213
IPR015915 Kelch-typ_b-propeller Gene3D 32 293
IPR036047 F-box-like_dom_sf SUPERFAMILY 10 55
IPR006652 Kelch_1 SMART 179 228
IPR006652 Kelch_1 SMART 130 178
IPR015915 Kelch-typ_b-propeller Gene3D 294 371
IPR001810 F-box_dom Pfam 19 49
IPR015915 Kelch-typ_b-propeller SUPERFAMILY 95 359

No CAZYmes available for this sequence

No external refs found!