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Description : AP2/B3-like transcriptional factor family protein
Gene families : OG_01_0006254 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006254_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d049094_T001 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d049094_T001 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_293 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_229 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR003340 | B3_DNA-bd | ProSiteProfiles | 98 | 195 |
| IPR044837 | REM16-like | PANTHER | 114 | 490 |
| IPR003340 | B3_DNA-bd | CDD | 98 | 193 |
| IPR015300 | DNA-bd_pseudobarrel_sf | Gene3D | 92 | 196 |
| IPR003340 | B3_DNA-bd | SMART | 395 | 490 |
| IPR003340 | B3_DNA-bd | SMART | 100 | 195 |
| IPR015300 | DNA-bd_pseudobarrel_sf | SUPERFAMILY | 98 | 195 |
| IPR003340 | B3_DNA-bd | CDD | 393 | 488 |
| IPR015300 | DNA-bd_pseudobarrel_sf | SUPERFAMILY | 388 | 488 |
| IPR003340 | B3_DNA-bd | ProSiteProfiles | 395 | 490 |
| IPR015300 | DNA-bd_pseudobarrel_sf | Gene3D | 372 | 490 |
| IPR003340 | B3_DNA-bd | Pfam | 100 | 193 |
| IPR003340 | B3_DNA-bd | Pfam | 397 | 488 |
| IPR003340 | B3_DNA-bd | ProSiteProfiles | 395 | 490 |
| IPR003340 | B3_DNA-bd | CDD | 393 | 488 |
| IPR015300 | DNA-bd_pseudobarrel_sf | Gene3D | 372 | 490 |
| IPR015300 | DNA-bd_pseudobarrel_sf | SUPERFAMILY | 388 | 488 |
| IPR003340 | B3_DNA-bd | SMART | 395 | 490 |
| IPR003340 | B3_DNA-bd | SMART | 100 | 195 |
| IPR044837 | REM16-like | PANTHER | 68 | 231 |
| IPR044837 | REM16-like | PANTHER | 280 | 500 |
| IPR015300 | DNA-bd_pseudobarrel_sf | SUPERFAMILY | 98 | 195 |
| IPR003340 | B3_DNA-bd | CDD | 98 | 193 |
| IPR015300 | DNA-bd_pseudobarrel_sf | Gene3D | 92 | 196 |
| IPR003340 | B3_DNA-bd | Pfam | 398 | 488 |
| IPR003340 | B3_DNA-bd | Pfam | 100 | 193 |
| IPR003340 | B3_DNA-bd | ProSiteProfiles | 98 | 195 |
No CAZYmes available for this sequence
| No external refs found! |