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  5. Zm00001d049226_T001

Zm00001d049226_T001


Description : Glycosyl hydrolase family protein with chitinase insertion domain


Gene families : OG_01_0010748 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010748_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d049226_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d049226_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_195
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_97


Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
MF GO:0008061 chitin binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001223 Glyco_hydro18_cat Pfam 45 388
IPR011583 Chitinase_II SMART 42 388
IPR029070 Chitinase_insertion_sf SUPERFAMILY 289 359
IPR001223 Glyco_hydro18_cat ProSiteProfiles 42 405
IPR029070 Chitinase_insertion_sf Gene3D 288 359
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 43 392
IPR001223 Glyco_hydro18_cat Pfam 45 388
IPR001223 Glyco_hydro18_cat ProSiteProfiles 42 405
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 43 392
IPR029070 Chitinase_insertion_sf Gene3D 288 359
IPR011583 Chitinase_II SMART 42 388
IPR029070 Chitinase_insertion_sf SUPERFAMILY 289 359
HMM Family HMM Length Query Length e-Value Query Start Query End
GH18 296 455 9.3e-48 45 398
No external refs found!