Cluster_4805 Sugarcane pan-transcriptome v1 100.0 % 0.001776 0.009991 Cluster_8190 Sugarcane pan-transcriptome v1 100.0 % 7.5e-05 0.000512 Cluster_2580 Sugarcane pan-transcriptome v1 66.67 % 0.005179 0.025895 Cluster_800 Sugarcane pan-transcriptome v1 12.36 % 0.001308 0.020081 Cluster_2434 Sugarcane pan-transcriptome v1 23.33 % 0.000204 0.017219 Cluster_13 Sugarcane pan-transcriptome v1 10.16 % 0.003038 0.022524 Cluster_386 Sugarcane pan-transcriptome v1 12.2 % 0.002359 0.014295 Cluster_614 Sugarcane pan-transcriptome v1 9.24 % 0.012065 0.049677 Cluster_1142 Sugarcane pan-transcriptome v1 83.33 % 1e-06 6e-06 Cluster_10276 Sugarcane pan-transcriptome v1 100.0 % 0.001776 0.003108 Zm00001d049239_T001 details
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Zm00001d049239_T001


Description : S-adenosyl-L-homocysteine hydrolase


Gene families : OG_01_0013598 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013598_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d049239_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d049239_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_104
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_186


Type GO Term Name Evidence Source
MF GO:0004013 adenosylhomocysteinase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR042172 Adenosylhomocyst_ase-like_sf Gene3D 15 485
IPR000043 Adenosylhomocysteinase-like CDD 23 473
IPR000043 Adenosylhomocysteinase-like Pfam 13 484
IPR000043 Adenosylhomocysteinase-like PIRSF 2 485
IPR036291 NAD(P)-bd_dom_sf SUPERFAMILY 240 403
IPR015878 Ado_hCys_hydrolase_NAD-bd Pfam 240 403
IPR020082 S-Ado-L-homoCys_hydrolase_CS ProSitePatterns 85 99
IPR000043 Adenosylhomocysteinase-like Hamap 9 477
IPR020082 S-Ado-L-homoCys_hydrolase_CS ProSitePatterns 262 279
IPR015878 Ado_hCys_hydrolase_NAD-bd SMART 240 403
IPR000043 Adenosylhomocysteinase-like NCBIfam 14 477
IPR000043 Adenosylhomocysteinase-like PANTHER 5 485
IPR000043 Adenosylhomocysteinase-like SMART 13 484
IPR000043 Adenosylhomocysteinase-like Hamap 9 477
IPR000043 Adenosylhomocysteinase-like CDD 23 473
IPR015878 Ado_hCys_hydrolase_NAD-bd SMART 240 403
IPR036291 NAD(P)-bd_dom_sf SUPERFAMILY 240 403
IPR020082 S-Ado-L-homoCys_hydrolase_CS ProSitePatterns 262 279
IPR020082 S-Ado-L-homoCys_hydrolase_CS ProSitePatterns 85 99
IPR000043 Adenosylhomocysteinase-like PIRSF 2 485
IPR000043 Adenosylhomocysteinase-like Pfam 13 484
IPR015878 Ado_hCys_hydrolase_NAD-bd Pfam 240 403
IPR000043 Adenosylhomocysteinase-like PANTHER 1 485
IPR042172 Adenosylhomocyst_ase-like_sf Gene3D 15 485
IPR000043 Adenosylhomocysteinase-like TIGRFAM 14 477
IPR000043 Adenosylhomocysteinase-like SMART 13 484

No CAZYmes available for this sequence

No external refs found!