1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d049240_T001

Zm00001d049240_T001


Description : alpha carbonic anhydrase 1


Gene families : OG_01_0000778 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000778_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d049240_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d049240_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_14
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_217


Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036398 CA_dom_sf SUPERFAMILY 36 251
IPR023561 Carbonic_anhydrase_a-class PANTHER 36 251
IPR018338 Carbonic_anhydrase_a-class_CS ProSitePatterns 132 148
IPR041891 Alpha_CA_prokaryot-like CDD 44 251
IPR001148 CA_dom ProSiteProfiles 35 257
IPR001148 CA_dom SMART 37 257
IPR036398 CA_dom_sf Gene3D 34 257
IPR001148 CA_dom Pfam 44 248
IPR001148 CA_dom Pfam 44 248
IPR001148 CA_dom SMART 37 257
IPR041891 Alpha_CA_prokaryot-like CDD 44 251
IPR036398 CA_dom_sf Gene3D 34 257
IPR001148 CA_dom ProSiteProfiles 35 257
IPR018338 Carbonic_anhydrase_a-class_CS ProSitePatterns 132 148
IPR023561 Carbonic_anhydrase_a-class PANTHER 6 257
IPR036398 CA_dom_sf SUPERFAMILY 36 251

No CAZYmes available for this sequence

No external refs found!