Zm00001d049269_T004

Description : C-terminal domain phosphatase-like 3

Gene families : OG_01_0001558 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001558_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d049269_T004
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d049269_T004
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_201

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004721	phosphoprotein phosphatase activity	ISM	GOs from InterProScan
MF	GO:0004722	protein serine/threonine phosphatase activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
MF	GO:0008420	RNA polymerase II CTD heptapeptide repeat phosphatase activity	ISM	GOs from InterProScan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016791	phosphatase activity	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0070940	obsolete dephosphorylation of RNA polymerase II C-terminal domain	ISM	GOs from InterProScan
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140994	RNA polymerase II CTD heptapeptide repeat modifying activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036420	BRCT_dom_sf	Gene3D	1146	1234
IPR039189	Fcp1	PANTHER	378	1235
IPR004274	FCP1_dom	SMART	921	1085
IPR001357	BRCT_dom	SMART	1143	1224
IPR023214	HAD_sf	Gene3D	907	1145
IPR036420	BRCT_dom_sf	SUPERFAMILY	1145	1234
IPR036412	HAD-like_sf	SUPERFAMILY	912	1085
IPR004274	FCP1_dom	ProSiteProfiles	918	1098
IPR011947	FCP1_euk	NCBIfam	918	1081
IPR001357	BRCT_dom	ProSiteProfiles	1141	1234
IPR004274	FCP1_dom	Pfam	923	1079
IPR001357	BRCT_dom	Pfam	1144	1220
IPR036412	HAD-like_sf	SUPERFAMILY	912	1085
IPR004274	FCP1_dom	Pfam	923	1079
IPR011947	FCP1_euk	TIGRFAM	918	1081
IPR036420	BRCT_dom_sf	SUPERFAMILY	1145	1234
IPR036420	BRCT_dom_sf	Gene3D	1146	1234
IPR004274	FCP1_dom	ProSiteProfiles	918	1098
IPR001357	BRCT_dom	ProSiteProfiles	1141	1234
IPR001357	BRCT_dom	Pfam	1144	1220
IPR039189	Fcp1	PANTHER	181	1235
IPR004274	FCP1_dom	SMART	921	1085
IPR023214	HAD_sf	Gene3D	907	1145
IPR001357	BRCT_dom	SMART	1143	1224

No CAZYmes available for this sequence

External Links

No external refs found!