Zm00001d049372_T002

Description : GTP-binding family protein

Gene families : OG_01_0004622 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004622_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d049372_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d049372_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_301
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_261

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006073	GTP-bd	Pfam	153	277
IPR030388	G_ERA_dom	ProSiteProfiles	149	330
IPR015946	KH_dom-like_a/b	Gene3D	370	433
IPR009019	KH_sf_prok-type	SUPERFAMILY	337	427
IPR030388	G_ERA_dom	CDD	150	325
IPR027417	P-loop_NTPase	Gene3D	144	334
IPR005225	Small_GTP-bd_dom	NCBIfam	152	321
IPR005662	GTPase_Era	PANTHER	374	467
IPR027417	P-loop_NTPase	SUPERFAMILY	149	334
IPR005662	GTPase_Era	NCBIfam	152	425
IPR005225	Small_GTP-bd_dom	TIGRFAM	152	321
IPR015946	KH_dom-like_a/b	Gene3D	370	433
IPR027417	P-loop_NTPase	SUPERFAMILY	149	334
IPR005662	GTPase_Era	PANTHER	35	468
IPR030388	G_ERA_dom	CDD	150	325
IPR009019	KH_sf_prok-type	SUPERFAMILY	337	427
IPR006073	GTP-bd	Pfam	153	277
IPR030388	G_ERA_dom	ProSiteProfiles	149	330
IPR005662	GTPase_Era	TIGRFAM	152	425
IPR027417	P-loop_NTPase	Gene3D	144	334

No CAZYmes available for this sequence

External Links

No external refs found!