Zm00001d049376_T001

Description : methyl-CPG-binding domain protein 13

Gene families : OG_01_0004810 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004810_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d049376_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d049376_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_250
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_58

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	Pfam	155	198
IPR016177	DNA-bd_dom_sf	SUPERFAMILY	153	200
IPR001739	Methyl_CpG_DNA-bd	ProSiteProfiles	145	210
IPR038945	MBD13-like	PANTHER	75	811
IPR038945	MBD13-like	PANTHER	580	825
IPR038945	MBD13-like	PANTHER	75	502
IPR038945	MBD13-like	PANTHER	536	574
IPR001739	Methyl_CpG_DNA-bd	Pfam	155	198
IPR038945	MBD13-like	PANTHER	1	57
IPR016177	DNA-bd_dom_sf	SUPERFAMILY	153	200
IPR001739	Methyl_CpG_DNA-bd	ProSiteProfiles	145	210

No CAZYmes available for this sequence

External Links

No external refs found!