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  5. Zm00001d049433_T001

Zm00001d049433_T001


Description : RmlC-like cupins superfamily protein


Gene families : OG_01_0001095 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001095_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d049433_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d049433_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_110
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_147


Type GO Term Name Evidence Source
MF GO:0030145 manganese ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011051 RmlC_Cupin_sf SUPERFAMILY 60 225
IPR019780 Germin_Mn-BS ProSitePatterns 105 118
IPR006045 Cupin_1 SMART 58 216
IPR001929 Germin PRINTS 179 194
IPR001929 Germin PRINTS 145 165
IPR001929 Germin PRINTS 110 130
IPR006045 Cupin_1 Pfam 63 212
IPR001929 Germin CDD 23 222
IPR014710 RmlC-like_jellyroll Gene3D 22 225
IPR006045 Cupin_1 SMART 58 216
IPR014710 RmlC-like_jellyroll Gene3D 22 225
IPR001929 Germin PRINTS 179 194
IPR001929 Germin PRINTS 145 165
IPR001929 Germin PRINTS 110 130
IPR019780 Germin_Mn-BS ProSitePatterns 105 118
IPR011051 RmlC_Cupin_sf SUPERFAMILY 60 225
IPR006045 Cupin_1 Pfam 63 212

No CAZYmes available for this sequence

No external refs found!