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  5. Zm00001d049608_T001

Zm00001d049608_T001


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0008228 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008228_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d049608_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d049608_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_254
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_29


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 87 431
IPR001680 WD40_rpt ProSiteProfiles 187 229
IPR019775 WD40_repeat_CS ProSitePatterns 207 221
IPR001680 WD40_rpt SMART 292 329
IPR001680 WD40_rpt SMART 392 428
IPR001680 WD40_rpt SMART 180 220
IPR001680 WD40_rpt SMART 144 177
IPR001680 WD40_rpt SMART 223 266
IPR001680 WD40_rpt SMART 341 382
IPR001680 WD40_rpt Pfam 185 220
IPR001680 WD40_rpt Pfam 235 266
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 86 428
IPR001680 WD40_rpt ProSiteProfiles 233 268
IPR001680 WD40_rpt ProSiteProfiles 233 268
IPR001680 WD40_rpt SMART 292 329
IPR001680 WD40_rpt SMART 392 428
IPR001680 WD40_rpt SMART 180 220
IPR001680 WD40_rpt SMART 223 266
IPR001680 WD40_rpt SMART 144 177
IPR001680 WD40_rpt SMART 341 382
IPR001680 WD40_rpt ProSiteProfiles 187 229
IPR001680 WD40_rpt Pfam 234 266
IPR001680 WD40_rpt Pfam 184 220
IPR019775 WD40_repeat_CS ProSitePatterns 207 221
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 86 428
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 87 431

No CAZYmes available for this sequence

No external refs found!