Zm00001d049656_T001

Description : eukaryotic translation initiation factor 3G1

Gene families : OG_01_0004720 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004720_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d049656_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d049656_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_63
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_175

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0003743	translation initiation factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	GOs from InterProScan
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	ISM	GOs from InterProScan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	184	287
IPR035979	RBD_domain_sf	SUPERFAMILY	203	286
IPR000504	RRM_dom	SMART	207	280
IPR034240	eIF3G_RRM	CDD	207	282
IPR000504	RRM_dom	Pfam	208	274
IPR017334	eIF3_g	Hamap	6	286
IPR017334	eIF3_g	PIRSF	1	287
IPR000504	RRM_dom	ProSiteProfiles	206	284
IPR024675	eIF3g_N	Pfam	30	155
IPR024675	eIF3g_N	CDD	35	154
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	184	287
IPR034240	eIF3G_RRM	CDD	207	282
IPR024675	eIF3g_N	Pfam	29	155
IPR000504	RRM_dom	SMART	207	280
IPR000504	RRM_dom	ProSiteProfiles	206	284
IPR024675	eIF3g_N	CDD	35	154
IPR017334	eIF3_g	Hamap	6	286
IPR017334	eIF3_g	PIRSF	1	287
IPR000504	RRM_dom	Pfam	208	274
IPR035979	RBD_domain_sf	SUPERFAMILY	203	286

No CAZYmes available for this sequence

External Links

No external refs found!