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  5. Zm00001d049714_T003

Zm00001d049714_T003


Description : DNA-binding bromodomain-containing protein


Gene families : OG_01_0004605 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004605_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d049714_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d049714_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_311
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_185


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001487 Bromodomain SMART 240 350
IPR036427 Bromodomain-like_sf SUPERFAMILY 240 345
IPR001487 Bromodomain Pfam 252 334
IPR018359 Bromodomain_CS ProSitePatterns 263 323
IPR001487 Bromodomain PRINTS 312 331
IPR001487 Bromodomain PRINTS 261 274
IPR001487 Bromodomain PRINTS 277 293
IPR036427 Bromodomain-like_sf Gene3D 227 349
IPR001487 Bromodomain ProSiteProfiles 258 331
IPR001487 Bromodomain Pfam 252 334
IPR036427 Bromodomain-like_sf SUPERFAMILY 240 345
IPR001487 Bromodomain SMART 240 350
IPR001487 Bromodomain ProSiteProfiles 258 331
IPR001487 Bromodomain PRINTS 312 331
IPR001487 Bromodomain PRINTS 261 274
IPR001487 Bromodomain PRINTS 277 293
IPR018359 Bromodomain_CS ProSitePatterns 263 323
IPR036427 Bromodomain-like_sf Gene3D 227 349

No CAZYmes available for this sequence

No external refs found!