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  5. Zm00001d050184_T010

Zm00001d050184_T010


Description : XB3 ortholog 2 in Arabidopsis thaliana


Gene families : OG_01_0005697 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005697_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d050184_T010
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d050184_T010
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_221
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_210


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017907 Znf_RING_CS ProSitePatterns 377 386
IPR002110 Ankyrin_rpt Pfam 222 250
IPR002110 Ankyrin_rpt Pfam 159 179
IPR002110 Ankyrin_rpt Pfam 265 295
IPR002110 Ankyrin_rpt Pfam 63 155
IPR002110 Ankyrin_rpt ProSiteProfiles 91 123
IPR001841 Znf_RING SMART 362 411
IPR001841 Znf_RING ProSiteProfiles 362 412
IPR013083 Znf_RING/FYVE/PHD Gene3D 348 430
IPR036770 Ankyrin_rpt-contain_sf Gene3D 51 195
IPR002110 Ankyrin_rpt ProSiteProfiles 124 156
IPR002110 Ankyrin_rpt ProSiteProfiles 264 296
IPR002110 Ankyrin_rpt ProSiteProfiles 221 253
IPR036770 Ankyrin_rpt-contain_sf Gene3D 196 325
IPR002110 Ankyrin_rpt PRINTS 222 237
IPR002110 Ankyrin_rpt PRINTS 280 294
IPR002110 Ankyrin_rpt ProSiteProfiles 158 179
IPR002110 Ankyrin_rpt SMART 158 188
IPR002110 Ankyrin_rpt SMART 91 120
IPR002110 Ankyrin_rpt SMART 124 153
IPR002110 Ankyrin_rpt SMART 264 293
IPR002110 Ankyrin_rpt SMART 221 250
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 61 319
IPR002110 Ankyrin_rpt SMART 158 188
IPR002110 Ankyrin_rpt SMART 91 120
IPR002110 Ankyrin_rpt SMART 124 153
IPR002110 Ankyrin_rpt SMART 264 293
IPR002110 Ankyrin_rpt SMART 221 250
IPR017907 Znf_RING_CS ProSitePatterns 377 386
IPR002110 Ankyrin_rpt ProSiteProfiles 264 296
IPR002110 Ankyrin_rpt PRINTS 222 237
IPR002110 Ankyrin_rpt PRINTS 280 294
IPR002110 Ankyrin_rpt ProSiteProfiles 221 253
IPR002110 Ankyrin_rpt ProSiteProfiles 158 179
IPR002110 Ankyrin_rpt ProSiteProfiles 124 156
IPR002110 Ankyrin_rpt Pfam 129 249
IPR002110 Ankyrin_rpt Pfam 61 122
IPR036770 Ankyrin_rpt-contain_sf Gene3D 51 195
IPR002110 Ankyrin_rpt ProSiteProfiles 91 123
IPR001841 Znf_RING ProSiteProfiles 362 412
IPR036770 Ankyrin_rpt-contain_sf Gene3D 196 325
IPR002110 Ankyrin_rpt Pfam 265 295
IPR001841 Znf_RING SMART 362 411
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 61 319
IPR013083 Znf_RING/FYVE/PHD Gene3D 348 430

No CAZYmes available for this sequence

No external refs found!