Zm00001d050300_T002

Description : RNA-binding (RRM/RBD/RNP motifs) family protein

Gene families : OG_01_0010133 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010133_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d050300_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d050300_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_165
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_236

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000504	RRM_dom	ProSiteProfiles	54	132
IPR000504	RRM_dom	SMART	55	128
IPR000504	RRM_dom	Pfam	56	125
IPR035979	RBD_domain_sf	SUPERFAMILY	43	147
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	35	129
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	35	129
IPR000504	RRM_dom	Pfam	56	125
IPR000504	RRM_dom	SMART	55	128
IPR000504	RRM_dom	ProSiteProfiles	54	132
IPR035979	RBD_domain_sf	SUPERFAMILY	43	147

No CAZYmes available for this sequence

External Links

No external refs found!