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  5. Zm00001d051161_T003

Zm00001d051161_T003


Description : phenylalanine ammonia-lyase 2


Gene families : OG_01_0000944 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000944_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d051161_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d051161_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_214
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_92


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
CC GO:0005737 cytoplasm ISM GOs from InterProScan
BP GO:0006559 L-phenylalanine catabolic process ISM GOs from InterProScan
MF GO:0016841 ammonia-lyase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR005922 Phe_NH3-lyase NCBIfam 11 691
IPR001106 Aromatic_Lyase Pfam 50 525
IPR022313 Phe/His_NH3-lyase_AS ProSitePatterns 185 201
IPR001106 Aromatic_Lyase CDD 47 513
IPR023144 Phe_NH3-lyase_shielding_dom_sf Gene3D 516 635
IPR008948 L-Aspartase-like SUPERFAMILY 11 700
IPR001106 Aromatic_Lyase PANTHER 9 700
IPR024083 Fumarase/histidase_N Gene3D 1 249
IPR001106 Aromatic_Lyase CDD 47 513
IPR022313 Phe/His_NH3-lyase_AS ProSitePatterns 185 201
IPR008948 L-Aspartase-like SUPERFAMILY 11 700
IPR024083 Fumarase/histidase_N Gene3D 1 249
IPR005922 Phe_NH3-lyase TIGRFAM 11 691
IPR001106 Aromatic_Lyase Pfam 50 522
IPR001106 Aromatic_Lyase PANTHER 1 701
IPR023144 Phe_NH3-lyase_shielding_dom_sf Gene3D 516 635

No CAZYmes available for this sequence

No external refs found!