- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : RNI-like superfamily protein
Gene families : OG_01_0006684 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006684_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d051219_T001 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d051219_T001 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_242 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_123 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 130 | 155 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 182 | 207 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 261 | 286 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 314 | 338 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 288 | 313 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 342 | 367 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 368 | 393 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 208 | 233 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 104 | 129 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 156 | 181 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 235 | 260 |
| IPR001611 | Leu-rich_rpt | Pfam | 261 | 284 |
| IPR001611 | Leu-rich_rpt | Pfam | 131 | 153 |
| IPR001611 | Leu-rich_rpt | Pfam | 208 | 231 |
| IPR001611 | Leu-rich_rpt | Pfam | 105 | 126 |
| IPR032675 | LRR_dom_sf | Gene3D | 236 | 412 |
| IPR032675 | LRR_dom_sf | Gene3D | 13 | 235 |
| IPR032675 | LRR_dom_sf | Gene3D | 236 | 412 |
| IPR001611 | Leu-rich_rpt | Pfam | 208 | 231 |
| IPR001611 | Leu-rich_rpt | Pfam | 105 | 126 |
| IPR001611 | Leu-rich_rpt | Pfam | 131 | 153 |
| IPR001611 | Leu-rich_rpt | Pfam | 261 | 284 |
| IPR032675 | LRR_dom_sf | Gene3D | 13 | 235 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 130 | 155 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 182 | 207 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 261 | 286 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 314 | 338 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 342 | 367 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 288 | 313 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 208 | 233 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 368 | 393 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 104 | 129 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 156 | 181 |
| IPR006553 | Leu-rich_rpt_Cys-con_subtyp | SMART | 235 | 260 |
No CAZYmes available for this sequence
| No external refs found! |