1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d051792_T001

Zm00001d051792_T001


Description : ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein


Gene families : OG_01_0003570 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003570_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d051792_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d051792_T001 No neighbors in network
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_302


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000408 Reg_chr_condens ProSiteProfiles 337 390
IPR002110 Ankyrin_rpt ProSiteProfiles 85 117
IPR000408 Reg_chr_condens ProSiteProfiles 177 228
IPR002110 Ankyrin_rpt ProSiteProfiles 119 151
IPR000408 Reg_chr_condens Pfam 228 282
IPR000408 Reg_chr_condens Pfam 178 225
IPR000408 Reg_chr_condens Pfam 337 387
IPR000408 Reg_chr_condens Pfam 294 333
IPR000408 Reg_chr_condens ProSiteProfiles 284 336
IPR002110 Ankyrin_rpt Pfam 75 147
IPR036770 Ankyrin_rpt-contain_sf Gene3D 63 165
IPR009091 RCC1/BLIP-II SUPERFAMILY 177 394
IPR002110 Ankyrin_rpt SMART 85 114
IPR002110 Ankyrin_rpt SMART 119 148
IPR009091 RCC1/BLIP-II Gene3D 166 430
IPR000408 Reg_chr_condens PRINTS 231 247
IPR000408 Reg_chr_condens PRINTS 212 225
IPR000408 Reg_chr_condens PRINTS 339 353
IPR000408 Reg_chr_condens PRINTS 178 194
IPR000408 Reg_chr_condens PRINTS 323 339
IPR000408 Reg_chr_condens ProSiteProfiles 229 286
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 76 160
IPR000408 Reg_chr_condens ProSiteProfiles 229 286
IPR000408 Reg_chr_condens PRINTS 231 247
IPR000408 Reg_chr_condens PRINTS 212 225
IPR000408 Reg_chr_condens PRINTS 339 353
IPR000408 Reg_chr_condens PRINTS 178 194
IPR000408 Reg_chr_condens PRINTS 323 339
IPR002110 Ankyrin_rpt Pfam 89 140
IPR000408 Reg_chr_condens ProSiteProfiles 337 390
IPR036770 Ankyrin_rpt-contain_sf Gene3D 63 165
IPR002110 Ankyrin_rpt ProSiteProfiles 85 117
IPR009091 RCC1/BLIP-II SUPERFAMILY 177 394
IPR002110 Ankyrin_rpt SMART 85 114
IPR002110 Ankyrin_rpt SMART 119 148
IPR009091 RCC1/BLIP-II Gene3D 166 430
IPR000408 Reg_chr_condens ProSiteProfiles 177 228
IPR000408 Reg_chr_condens ProSiteProfiles 284 336
IPR002110 Ankyrin_rpt ProSiteProfiles 119 151
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 76 160
IPR000408 Reg_chr_condens Pfam 294 333
IPR000408 Reg_chr_condens Pfam 337 387
IPR000408 Reg_chr_condens Pfam 178 225
IPR000408 Reg_chr_condens Pfam 228 282

No CAZYmes available for this sequence

No external refs found!