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  5. Zm00001d051838_T001

Zm00001d051838_T001


Description : CCCH-type zinc finger family protein


Gene families : OG_01_0000843 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000843_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d051838_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d051838_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_306
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_185


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000571 Znf_CCCH ProSiteProfiles 46 72
IPR036855 Znf_CCCH_sf SUPERFAMILY 111 134
IPR041686 Znf-CCCH_3 Pfam 16 73
IPR000571 Znf_CCCH SMART 110 135
IPR000571 Znf_CCCH SMART 48 71
IPR000571 Znf_CCCH SMART 15 43
IPR000571 Znf_CCCH ProSiteProfiles 15 44
IPR000571 Znf_CCCH ProSiteProfiles 109 136
IPR000571 Znf_CCCH SMART 110 135
IPR000571 Znf_CCCH SMART 48 71
IPR000571 Znf_CCCH SMART 15 43
IPR036855 Znf_CCCH_sf SUPERFAMILY 111 134
IPR000571 Znf_CCCH ProSiteProfiles 109 136
IPR000571 Znf_CCCH ProSiteProfiles 46 72
IPR041686 Znf-CCCH_3 Pfam 16 73
IPR000571 Znf_CCCH ProSiteProfiles 15 44

No CAZYmes available for this sequence

No external refs found!