Zm00001d051885_T001


Description : fibrillarin 2


Gene families : OG_01_0006835 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006835_tree

Sequence : cds (download), rna (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d051885_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d051885_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_256
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_257


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISM GOs from InterProScan
BP GO:0006364 rRNA processing ISM GOs from InterProScan
MF GO:0008168 methyltransferase activity ISM GOs from InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Source Start Stop
IPR029063 SAM-dependent_MTases_sf Gene3D 123 289
IPR020813 Fibrillarin_CS ProSitePatterns 170 184
IPR000692 Fibrillarin SMART 72 302
IPR000692 Fibrillarin Pfam 74 281
IPR000692 Fibrillarin PRINTS 195 224
IPR000692 Fibrillarin PRINTS 225 254
IPR000692 Fibrillarin PRINTS 90 109
IPR000692 Fibrillarin PRINTS 145 166
IPR000692 Fibrillarin PRINTS 118 137
IPR000692 Fibrillarin PRINTS 170 187
IPR029063 SAM-dependent_MTases_sf SUPERFAMILY 72 281
IPR000692 Fibrillarin Hamap 83 313
IPR000692 Fibrillarin Pfam 74 281
IPR029063 SAM-dependent_MTases_sf SUPERFAMILY 72 281
IPR000692 Fibrillarin SMART 72 302
IPR020813 Fibrillarin_CS ProSitePatterns 170 184
IPR000692 Fibrillarin Hamap 83 313
IPR000692 Fibrillarin PRINTS 195 224
IPR000692 Fibrillarin PRINTS 225 254
IPR000692 Fibrillarin PRINTS 90 109
IPR000692 Fibrillarin PRINTS 145 166
IPR000692 Fibrillarin PRINTS 118 137
IPR000692 Fibrillarin PRINTS 170 187

No CAZYmes available for this sequence

No external refs found!