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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0014267 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014267_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d051893_T001 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d051893_T001 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_236 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_158 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 280 | 478 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 450 | 573 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 49 | 311 |
| IPR019734 | TPR_repeat | SMART | 198 | 231 |
| IPR019734 | TPR_repeat | SMART | 487 | 520 |
| IPR019734 | TPR_repeat | SMART | 404 | 437 |
| IPR019734 | TPR_repeat | SMART | 240 | 273 |
| IPR019734 | TPR_repeat | SMART | 141 | 174 |
| IPR019734 | TPR_repeat | SMART | 529 | 562 |
| IPR019734 | TPR_repeat | SMART | 445 | 478 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 197 | 307 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 480 | 612 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 319 | 479 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 197 | 307 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 280 | 478 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 49 | 311 |
| IPR019734 | TPR_repeat | SMART | 198 | 231 |
| IPR019734 | TPR_repeat | SMART | 487 | 520 |
| IPR019734 | TPR_repeat | SMART | 404 | 437 |
| IPR019734 | TPR_repeat | SMART | 240 | 273 |
| IPR019734 | TPR_repeat | SMART | 529 | 562 |
| IPR019734 | TPR_repeat | SMART | 141 | 174 |
| IPR019734 | TPR_repeat | SMART | 445 | 478 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 480 | 612 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 319 | 479 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 450 | 573 |
No CAZYmes available for this sequence
| No external refs found! |