Zm00001d051995_T001

Description : proliferating cell nuclear antigen 2

Gene families : OG_01_0011313 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011313_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d051995_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d051995_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_262

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006275	regulation of DNA replication	ISM	GOs from InterProScan
MF	GO:0008047	enzyme activator activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030337	DNA polymerase processivity factor activity	ISM	GOs from InterProScan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR022659	Pr_cel_nuc_antig_CS	ProSitePatterns	61	79
IPR000730	Pr_cel_nuc_antig	Hamap	2	255
IPR046938	DNA_clamp_sf	SUPERFAMILY	127	255
IPR000730	Pr_cel_nuc_antig	PRINTS	34	52
IPR000730	Pr_cel_nuc_antig	PRINTS	241	258
IPR000730	Pr_cel_nuc_antig	PRINTS	110	132
IPR000730	Pr_cel_nuc_antig	PRINTS	10	29
IPR000730	Pr_cel_nuc_antig	PRINTS	56	80
IPR000730	Pr_cel_nuc_antig	PRINTS	203	217
IPR000730	Pr_cel_nuc_antig	PANTHER	1	260
IPR022659	Pr_cel_nuc_antig_CS	ProSitePatterns	34	57
IPR022648	Pr_cel_nuc_antig_N	Pfam	1	125
IPR046938	DNA_clamp_sf	SUPERFAMILY	1	126
IPR022649	Pr_cel_nuc_antig_C	Pfam	127	254
IPR000730	Pr_cel_nuc_antig	NCBIfam	1	259
IPR000730	Pr_cel_nuc_antig	TIGRFAM	1	259
IPR022648	Pr_cel_nuc_antig_N	Pfam	1	125
IPR000730	Pr_cel_nuc_antig	PRINTS	34	52
IPR000730	Pr_cel_nuc_antig	PRINTS	241	258
IPR000730	Pr_cel_nuc_antig	PRINTS	110	132
IPR000730	Pr_cel_nuc_antig	PRINTS	10	29
IPR000730	Pr_cel_nuc_antig	PRINTS	56	80
IPR000730	Pr_cel_nuc_antig	PRINTS	203	217
IPR000730	Pr_cel_nuc_antig	Hamap	2	255
IPR022659	Pr_cel_nuc_antig_CS	ProSitePatterns	34	57
IPR022649	Pr_cel_nuc_antig_C	Pfam	127	254
IPR022659	Pr_cel_nuc_antig_CS	ProSitePatterns	61	79

No CAZYmes available for this sequence

External Links

No external refs found!