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  5. Zm00001d052056_T005

Zm00001d052056_T005


Description : T-complex protein 1 alpha subunit


Gene families : OG_01_0006603 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006603_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d052056_T005
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d052056_T005
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_114
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_241


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006457 protein folding ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
MF GO:0051082 unfolded protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002423 Cpn60/GroEL/TCP-1 Pfam 31 536
IPR002194 Chaperonin_TCP-1_CS ProSitePatterns 36 48
IPR017998 Chaperone_TCP-1 PANTHER 13 537
IPR027410 TCP-1-like_intermed_sf Gene3D 140 409
IPR027413 GROEL-like_equatorial_sf Gene3D 28 535
IPR012715 Chap_CCT_alpha NCBIfam 10 541
IPR012715 Chap_CCT_alpha CDD 12 538
IPR017998 Chaperone_TCP-1 PRINTS 33 49
IPR017998 Chaperone_TCP-1 PRINTS 377 399
IPR017998 Chaperone_TCP-1 PRINTS 85 104
IPR017998 Chaperone_TCP-1 PRINTS 411 423
IPR017998 Chaperone_TCP-1 PRINTS 55 73
IPR002194 Chaperonin_TCP-1_CS ProSitePatterns 85 93
IPR002194 Chaperonin_TCP-1_CS ProSitePatterns 57 73
IPR027409 GroEL-like_apical_dom_sf SUPERFAMILY 210 382
IPR027409 GroEL-like_apical_dom_sf Gene3D 215 373
IPR027410 TCP-1-like_intermed_sf SUPERFAMILY 147 409
IPR027413 GROEL-like_equatorial_sf SUPERFAMILY 13 535
IPR017998 Chaperone_TCP-1 PRINTS 33 49
IPR017998 Chaperone_TCP-1 PRINTS 377 399
IPR017998 Chaperone_TCP-1 PRINTS 85 104
IPR017998 Chaperone_TCP-1 PRINTS 411 423
IPR017998 Chaperone_TCP-1 PRINTS 55 73
IPR027410 TCP-1-like_intermed_sf SUPERFAMILY 147 409
IPR012715 Chap_CCT_alpha CDD 12 538
IPR012715 Chap_CCT_alpha TIGRFAM 10 541
IPR027410 TCP-1-like_intermed_sf Gene3D 140 409
IPR027409 GroEL-like_apical_dom_sf Gene3D 215 373
IPR002194 Chaperonin_TCP-1_CS ProSitePatterns 85 93
IPR017998 Chaperone_TCP-1 PANTHER 4 542
IPR002194 Chaperonin_TCP-1_CS ProSitePatterns 36 48
IPR027413 GROEL-like_equatorial_sf SUPERFAMILY 13 535
IPR002423 Cpn60/GroEL/TCP-1 Pfam 31 536
IPR027413 GROEL-like_equatorial_sf Gene3D 28 535
IPR002194 Chaperonin_TCP-1_CS ProSitePatterns 57 73
IPR027409 GroEL-like_apical_dom_sf SUPERFAMILY 210 382

No CAZYmes available for this sequence

No external refs found!