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  5. Zm00001d052149_T015

Zm00001d052149_T015


Description : PHD finger family protein


Gene families : OG_01_0004095 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004095_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d052149_T015
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d052149_T015
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_141


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR034732 EPHD ProSiteProfiles 1171 1280
IPR011011 Znf_FYVE_PHD SUPERFAMILY 288 346
IPR042011 ATX3/4/5_PHD CDD 298 344
IPR001965 Znf_PHD SMART 298 345
IPR001965 Znf_PHD SMART 1102 1147
IPR001965 Znf_PHD SMART 1226 1280
IPR001965 Znf_PHD SMART 431 487
IPR013083 Znf_RING/FYVE/PHD Gene3D 292 349
IPR013083 Znf_RING/FYVE/PHD Gene3D 1094 1151
IPR019787 Znf_PHD-finger ProSiteProfiles 296 347
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 299 344
IPR034732 EPHD ProSiteProfiles 363 487
IPR013083 Znf_RING/FYVE/PHD Gene3D 1171 1282
IPR013083 Znf_RING/FYVE/PHD Gene3D 361 489
IPR011011 Znf_FYVE_PHD SUPERFAMILY 1081 1147
IPR019787 Znf_PHD-finger ProSiteProfiles 1100 1149
IPR011011 Znf_FYVE_PHD SUPERFAMILY 288 346
IPR034732 EPHD ProSiteProfiles 1171 1280
IPR019787 Znf_PHD-finger ProSiteProfiles 1100 1149
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 299 344
IPR011011 Znf_FYVE_PHD SUPERFAMILY 1081 1147
IPR019787 Znf_PHD-finger ProSiteProfiles 296 347
IPR001965 Znf_PHD SMART 298 345
IPR001965 Znf_PHD SMART 1102 1147
IPR001965 Znf_PHD SMART 1226 1280
IPR001965 Znf_PHD SMART 431 487
IPR013083 Znf_RING/FYVE/PHD Gene3D 1171 1282
IPR013083 Znf_RING/FYVE/PHD Gene3D 361 489
IPR042011 ATX3/4/5_PHD CDD 298 344
IPR034732 EPHD ProSiteProfiles 363 487
IPR013083 Znf_RING/FYVE/PHD Gene3D 292 349
IPR013083 Znf_RING/FYVE/PHD Gene3D 1094 1151

No CAZYmes available for this sequence

No external refs found!