1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d052278_T001

Zm00001d052278_T001


Description : xylose isomerase family protein


Gene families : OG_01_0003550 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003550_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d052278_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d052278_T001 No neighbors in network
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_235


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
MF GO:0009045 xylose isomerase activity ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001998 Xylose_isomerase PRINTS 176 196
IPR001998 Xylose_isomerase PRINTS 199 218
IPR001998 Xylose_isomerase PRINTS 250 269
IPR001998 Xylose_isomerase PRINTS 223 244
IPR001998 Xylose_isomerase PRINTS 135 157
IPR036237 Xyl_isomerase-like_sf SUPERFAMILY 82 374
IPR011990 TPR-like_helical_dom_sf Gene3D 5 84
IPR001998 Xylose_isomerase ProSiteProfiles 78 309
IPR001998 Xylose_isomerase ProSiteProfiles 78 309
IPR036237 Xyl_isomerase-like_sf SUPERFAMILY 82 374
IPR011990 TPR-like_helical_dom_sf Gene3D 5 84
IPR001998 Xylose_isomerase PRINTS 176 196
IPR001998 Xylose_isomerase PRINTS 199 218
IPR001998 Xylose_isomerase PRINTS 250 269
IPR001998 Xylose_isomerase PRINTS 223 244
IPR001998 Xylose_isomerase PRINTS 135 157

No CAZYmes available for this sequence

No external refs found!