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  5. Zm00001d052451_T001

Zm00001d052451_T001


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG_01_0020736 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0020736_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d052451_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d052451_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_65
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_160


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015915 Kelch-typ_b-propeller SUPERFAMILY 140 413
IPR001810 F-box_dom SMART 54 94
IPR001810 F-box_dom Pfam 53 91
IPR036047 F-box-like_dom_sf SUPERFAMILY 43 120
IPR006652 Kelch_1 SMART 199 242
IPR006652 Kelch_1 Pfam 187 227
IPR001810 F-box_dom ProSiteProfiles 48 93
IPR015915 Kelch-typ_b-propeller Gene3D 104 415
IPR015915 Kelch-typ_b-propeller Gene3D 104 415
IPR001810 F-box_dom SMART 54 94
IPR001810 F-box_dom Pfam 52 90
IPR036047 F-box-like_dom_sf SUPERFAMILY 43 120
IPR015915 Kelch-typ_b-propeller SUPERFAMILY 140 413
IPR006652 Kelch_1 SMART 199 242
IPR006652 Kelch_1 Pfam 187 227
IPR001810 F-box_dom ProSiteProfiles 48 93

No CAZYmes available for this sequence

No external refs found!