Zm00001d052472_T012

Description : 2-isopropylmalate synthase 1

Gene families : OG_01_0001292 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001292_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d052472_T012
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d052472_T012
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_64
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_205

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0003852	2-isopropylmalate synthase activity	ISM	GOs from InterProScan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006551	leucine metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009081	branched-chain amino acid metabolic process	None	Extended
BP	GO:0009082	branched-chain amino acid biosynthetic process	None	Extended
BP	GO:0009098	leucine biosynthetic process	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	ISM	GOs from InterProScan
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013709	2-isopropylmalate_synth_dimer	SMART	460	638
IPR036230	LeuA_allosteric_dom_sf	Gene3D	484	638
IPR000891	PYR_CT	Pfam	93	361
IPR036230	LeuA_allosteric_dom_sf	SUPERFAMILY	570	637
IPR002034	AIPM/Hcit_synth_CS	ProSitePatterns	100	116
IPR000891	PYR_CT	ProSiteProfiles	93	355
IPR013709	2-isopropylmalate_synth_dimer	Pfam	460	534
IPR013709	2-isopropylmalate_synth_dimer	Pfam	561	637
IPR013785	Aldolase_TIM	Gene3D	88	365
IPR036230	LeuA_allosteric_dom_sf	Gene3D	484	638
IPR036230	LeuA_allosteric_dom_sf	SUPERFAMILY	570	637
IPR002034	AIPM/Hcit_synth_CS	ProSitePatterns	100	116
IPR013709	2-isopropylmalate_synth_dimer	SMART	460	638
IPR000891	PYR_CT	ProSiteProfiles	93	355
IPR013709	2-isopropylmalate_synth_dimer	Pfam	560	637
IPR013709	2-isopropylmalate_synth_dimer	Pfam	461	533
IPR013785	Aldolase_TIM	Gene3D	88	365
IPR000891	PYR_CT	Pfam	93	361

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d052472_T012

Expression Profile

Co-expression Networks

Functional Annotation