1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d052622_T001

Zm00001d052622_T001


Description : GLU-ADT subunit B


Gene families : OG_01_0005802 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005802_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d052622_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d052622_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_192
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_7


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0016874 ligase activity ISM GOs from InterProScan
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR004413 GatB Hamap 66 544
IPR004413 GatB NCBIfam 67 544
IPR023168 GatB_Yqey_C_2 Gene3D 483 544
IPR017959 Asn/Gln-tRNA_amidoTrfase_suB/E PANTHER 67 543
IPR017958 Gln-tRNA_amidoTrfase_suB_CS ProSitePatterns 211 225
IPR003789 Asn/Gln_tRNA_amidoTrase-B-like SUPERFAMILY 396 544
IPR014746 Gln_synth/guanido_kin_cat_dom SUPERFAMILY 68 365
IPR018027 Asn/Gln_amidotransferase Pfam 397 543
IPR006075 Asn/Gln-tRNA_Trfase_suB/E_cat Pfam 70 357
IPR018027 Asn/Gln_amidotransferase SMART 396 543
IPR042114 GatB_C_1 Gene3D 365 419
IPR042114 GatB_C_1 Gene3D 365 419
IPR014746 Gln_synth/guanido_kin_cat_dom SUPERFAMILY 68 365
IPR003789 Asn/Gln_tRNA_amidoTrase-B-like SUPERFAMILY 396 544
IPR004413 GatB TIGRFAM 67 544
IPR006075 Asn/Gln-tRNA_Trfase_suB/E_cat Pfam 70 357
IPR023168 GatB_Yqey_C_2 Gene3D 483 544
IPR018027 Asn/Gln_amidotransferase Pfam 397 543
IPR017958 Gln-tRNA_amidoTrfase_suB_CS ProSitePatterns 211 225
IPR018027 Asn/Gln_amidotransferase SMART 396 543
IPR017959 Asn/Gln-tRNA_amidoTrfase_suB/E PANTHER 56 545
IPR004413 GatB Hamap 66 544

No CAZYmes available for this sequence

No external refs found!