Zm00001d052709_T002

Description : IBR domain-containing protein

Gene families : OG_01_0000742 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000742_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d052709_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d052709_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_296
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_125

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001876	Znf_RanBP2	SMART	465	489
IPR036443	Znf_RanBP2_sf	SUPERFAMILY	463	490
IPR031127	E3_UB_ligase_RBR	PANTHER	51	297
IPR002867	IBR_dom	Pfam	108	169
IPR002867	IBR_dom	Pfam	186	233
IPR001876	Znf_RanBP2	ProSitePatterns	467	486
IPR002867	IBR_dom	SMART	182	243
IPR002867	IBR_dom	SMART	108	169
IPR001876	Znf_RanBP2	ProSiteProfiles	463	491
IPR044066	TRIAD_supradom	ProSiteProfiles	30	247
IPR045840	Ariadne	Pfam	257	374
IPR001876	Znf_RanBP2	ProSitePatterns	467	486
IPR001876	Znf_RanBP2	ProSiteProfiles	463	491
IPR001876	Znf_RanBP2	SMART	465	489
IPR002867	IBR_dom	Pfam	108	169
IPR002867	IBR_dom	Pfam	186	234
IPR031127	E3_UB_ligase_RBR	PANTHER	64	440
IPR002867	IBR_dom	SMART	182	243
IPR002867	IBR_dom	SMART	108	169
IPR044066	TRIAD_supradom	ProSiteProfiles	30	247
IPR045840	Ariadne	Pfam	257	374
IPR036443	Znf_RanBP2_sf	SUPERFAMILY	463	490

No CAZYmes available for this sequence

External Links

No external refs found!