Zm00001d052803_T004

Description : ortholog of human splicing factor SC35

Gene families : OG_01_0000399 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000399_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d052803_T004	No neighbors in network
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d052803_T004
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_173

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	61	140
IPR000504	RRM_dom	ProSiteProfiles	46	131
IPR000504	RRM_dom	Pfam	63	124
IPR035979	RBD_domain_sf	SUPERFAMILY	63	140
IPR000504	RRM_dom	SMART	48	127
IPR000504	RRM_dom	Pfam	63	124
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	61	140
IPR000504	RRM_dom	SMART	48	127
IPR035979	RBD_domain_sf	SUPERFAMILY	63	140
IPR000504	RRM_dom	ProSiteProfiles	46	131

No CAZYmes available for this sequence

External Links

No external refs found!