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  5. Zm00001d052875_T001

Zm00001d052875_T001


Description : SHV3-like 1


Gene families : OG_01_0002548 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002548_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d052875_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d052875_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_247
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_154


Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process ISM GOs from InterProScan
MF GO:0008081 phosphoric diester hydrolase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017946 PLC-like_Pdiesterase_TIM-brl SUPERFAMILY 54 357
IPR017946 PLC-like_Pdiesterase_TIM-brl Gene3D 52 358
IPR017946 PLC-like_Pdiesterase_TIM-brl Gene3D 372 664
IPR030395 GP_PDE_dom Pfam 379 657
IPR030395 GP_PDE_dom Pfam 61 351
IPR017946 PLC-like_Pdiesterase_TIM-brl SUPERFAMILY 373 663
IPR030395 GP_PDE_dom ProSiteProfiles 54 358
IPR030395 GP_PDE_dom ProSiteProfiles 374 663
IPR030395 GP_PDE_dom ProSiteProfiles 374 663
IPR017946 PLC-like_Pdiesterase_TIM-brl SUPERFAMILY 373 663
IPR030395 GP_PDE_dom Pfam 62 351
IPR030395 GP_PDE_dom Pfam 379 657
IPR017946 PLC-like_Pdiesterase_TIM-brl SUPERFAMILY 54 357
IPR017946 PLC-like_Pdiesterase_TIM-brl Gene3D 52 358
IPR017946 PLC-like_Pdiesterase_TIM-brl Gene3D 372 664
IPR030395 GP_PDE_dom ProSiteProfiles 54 358

No CAZYmes available for this sequence

No external refs found!