Zm00001d053171_T001

Description : LRR and NB-ARC domains-containing disease resistance protein

Gene families : OG_01_0009473 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009473_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d053171_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d053171_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_249
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_165

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	ISM	GOs from InterProScan
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR025886	PP2-like	Pfam	1530	1686
IPR042197	Apaf_helical	Gene3D	320	395
IPR041118	Rx_N	Pfam	13	98
IPR027417	P-loop_NTPase	Gene3D	147	311
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	772	796
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	957	981
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	676	700
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	605	628
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	1418	1441
IPR036388	WH-like_DNA-bd_sf	Gene3D	403	494
IPR032675	LRR_dom_sf	Gene3D	1166	1328
IPR032675	LRR_dom_sf	Gene3D	834	1051
IPR032675	LRR_dom_sf	Gene3D	1355	1517
IPR032675	LRR_dom_sf	Gene3D	720	829
IPR027417	P-loop_NTPase	SUPERFAMILY	157	422
IPR032675	LRR_dom_sf	Gene3D	500	719
IPR002182	NB-ARC	Pfam	172	408
IPR001611	Leu-rich_rpt	Pfam	678	700
IPR039203	RGA2/3-like	PANTHER	748	1415
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	772	796
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	957	981
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	676	700
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	605	628
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	1418	1441
IPR044974	Disease_R_plants	PANTHER	1052	1316
IPR044974	Disease_R_plants	PANTHER	1367	1542
IPR042197	Apaf_helical	Gene3D	320	395
IPR032675	LRR_dom_sf	Gene3D	500	719
IPR027417	P-loop_NTPase	Gene3D	147	311
IPR044974	Disease_R_plants	PANTHER	2	1035
IPR025886	PP2-like	Pfam	1530	1686
IPR027417	P-loop_NTPase	SUPERFAMILY	157	422
IPR002182	NB-ARC	Pfam	191	408
IPR036388	WH-like_DNA-bd_sf	Gene3D	403	494
IPR041118	Rx_N	Pfam	13	94
IPR032675	LRR_dom_sf	Gene3D	1166	1328
IPR032675	LRR_dom_sf	Gene3D	1355	1517
IPR032675	LRR_dom_sf	Gene3D	834	1051
IPR032675	LRR_dom_sf	Gene3D	720	829

No CAZYmes available for this sequence

External Links

No external refs found!