Zm00001d053189_T004

Description : Transcription elongation factor (TFIIS) family protein

Gene families : OG_01_0001906 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001906_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d053189_T004
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d053189_T004
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_5
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_120

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR017923	TFIIS_N	ProSiteProfiles	116	187
IPR035441	TFIIS/LEDGF_dom_sf	Gene3D	105	195
IPR003617	TFIIS/CRSP70_N_sub	SMART	115	186
IPR035441	TFIIS/LEDGF_dom_sf	SUPERFAMILY	113	197
IPR044790	MD26C-like	PANTHER	1	358
IPR017923	TFIIS_N	Pfam	135	184
IPR003617	TFIIS/CRSP70_N_sub	SMART	115	186
IPR017923	TFIIS_N	ProSiteProfiles	116	187
IPR035441	TFIIS/LEDGF_dom_sf	SUPERFAMILY	113	197
IPR035441	TFIIS/LEDGF_dom_sf	Gene3D	105	195
IPR017923	TFIIS_N	Pfam	135	184
IPR044790	MD26C-like	PANTHER	1	359

No CAZYmes available for this sequence

External Links

No external refs found!