Zm00001d053293_T001

Description : Calcium-binding EF-hand family protein

Gene families : OG_01_0004354 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004354_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d053293_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d053293_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_23
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_157

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISM	GOs from InterProScan
MF	GO:0005515	protein binding	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019722	calcium-mediated signaling	ISM	GOs from InterProScan
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	ISM	GOs from InterProScan
BP	GO:0019932	second-messenger-mediated signaling	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002048	EF_hand_dom	ProSiteProfiles	149	184
IPR002048	EF_hand_dom	Pfam	74	95
IPR011992	EF-hand-dom_pair	SUPERFAMILY	19	192
IPR002048	EF_hand_dom	ProSiteProfiles	105	140
IPR002048	EF_hand_dom	Pfam	107	173
IPR002048	EF_hand_dom	SMART	153	181
IPR002048	EF_hand_dom	SMART	72	100
IPR002048	EF_hand_dom	SMART	109	137
IPR002048	EF_hand_dom	ProSiteProfiles	68	103
IPR018247	EF_Hand_1_Ca_BS	ProSitePatterns	162	174
IPR002048	EF_hand_dom	CDD	109	174
IPR045198	CNBL1-10	PANTHER	5	194
IPR002048	EF_hand_dom	ProSiteProfiles	149	184
IPR002048	EF_hand_dom	SMART	72	100
IPR002048	EF_hand_dom	SMART	153	181
IPR002048	EF_hand_dom	SMART	109	137
IPR018247	EF_Hand_1_Ca_BS	ProSitePatterns	162	174
IPR045198	CNBL1-10	PANTHER	1	194
IPR002048	EF_hand_dom	ProSiteProfiles	105	140
IPR011992	EF-hand-dom_pair	SUPERFAMILY	19	192
IPR002048	EF_hand_dom	CDD	109	174
IPR002048	EF_hand_dom	ProSiteProfiles	68	103
IPR002048	EF_hand_dom	Pfam	74	95
IPR002048	EF_hand_dom	Pfam	154	177

No CAZYmes available for this sequence

External Links

No external refs found!