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  5. Zm00001d053452_T002

Zm00001d053452_T002


Description : CTC-interacting domain 8


Gene families : OG_01_0000927 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000927_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d053452_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d053452_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_120
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_125


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 143 274
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 281 377
IPR000504 RRM_dom ProSiteProfiles 194 273
IPR035979 RBD_domain_sf SUPERFAMILY 194 330
IPR009818 Ataxin-2_C Pfam 72 86
IPR000504 RRM_dom SMART 195 269
IPR000504 RRM_dom SMART 296 367
IPR000504 RRM_dom Pfam 196 262
IPR035979 RBD_domain_sf SUPERFAMILY 194 330
IPR000504 RRM_dom Pfam 196 262
IPR009818 Ataxin-2_C Pfam 72 86
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 143 274
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 281 377
IPR000504 RRM_dom ProSiteProfiles 194 273
IPR000504 RRM_dom SMART 195 269
IPR000504 RRM_dom SMART 296 367

No CAZYmes available for this sequence

No external refs found!