Zm00001d053521_T001

Description : hAT transposon superfamily

Gene families : OG_01_0001259 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001259_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d053521_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d053521_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_108
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_22

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR007021	DUF659	Pfam	330	410
IPR007021	DUF659	Pfam	193	299
IPR012337	RNaseH-like_sf	SUPERFAMILY	227	648
IPR003656	Znf_BED	ProSiteProfiles	6	60
IPR007021	DUF659	Pfam	193	299
IPR007021	DUF659	Pfam	330	410
IPR012337	RNaseH-like_sf	SUPERFAMILY	227	648
IPR003656	Znf_BED	ProSiteProfiles	6	60

No CAZYmes available for this sequence

External Links

No external refs found!