Zm00001d053576_T001

Description : Translation elongation factor EF1B, gamma chain

Gene families : OG_01_0008948 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008948_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d053576_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d053576_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_127
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_42

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003746	translation elongation factor activity	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004364	glutathione transferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006414	translational elongation	ISM	GOs from InterProScan
BP	GO:0006749	glutathione metabolic process	ISM	GOs from InterProScan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001662	EF1B_G_C	ProSiteProfiles	277	437
IPR001662	EF1B_G_C	SMART	276	384
IPR036433	EF1B_G_C_sf	Gene3D	277	437
IPR010987	Glutathione-S-Trfase_C-like	ProSiteProfiles	110	245
IPR040079	Glutathione_S-Trfase	SFLD	28	216
IPR004045	Glutathione_S-Trfase_N	ProSiteProfiles	24	105
IPR004046	GST_C	Pfam	156	220
IPR036433	EF1B_G_C_sf	SUPERFAMILY	277	437
IPR036249	Thioredoxin-like_sf	SUPERFAMILY	21	108
IPR044628	EF-1-gamma_plant	PANTHER	26	437
IPR004045	Glutathione_S-Trfase_N	Pfam	33	98
IPR001662	EF1B_G_C	Pfam	276	384
IPR036282	Glutathione-S-Trfase_C_sf	SUPERFAMILY	103	233
IPR001662	EF1B_G_C	Pfam	276	384
IPR004045	Glutathione_S-Trfase_N	Pfam	33	98
IPR036433	EF1B_G_C_sf	Gene3D	277	437
IPR036282	Glutathione-S-Trfase_C_sf	SUPERFAMILY	103	233
IPR040079	Glutathione_S-Trfase	SFLD	28	216
IPR036249	Thioredoxin-like_sf	SUPERFAMILY	21	108
IPR004046	GST_C	Pfam	156	220
IPR044628	EF-1-gamma_plant	PANTHER	27	437
IPR004045	Glutathione_S-Trfase_N	ProSiteProfiles	24	105
IPR010987	Glutathione-S-Trfase_C-like	ProSiteProfiles	110	245
IPR036433	EF1B_G_C_sf	SUPERFAMILY	277	437
IPR001662	EF1B_G_C	ProSiteProfiles	277	437
IPR001662	EF1B_G_C	SMART	276	384

No CAZYmes available for this sequence

External Links

No external refs found!