Zm00001d053579_T001

Description : cytokinin oxidase 5

Gene families : OG_01_0008820 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008820_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d053579_T001	No neighbors in network
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d053579_T001
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_55

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009690	cytokinin metabolic process	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
MF	GO:0016491	oxidoreductase activity	ISM	GOs from InterProScan
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	None	Extended
MF	GO:0019139	cytokinin dehydrogenase activity	ISM	GOs from InterProScan
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	ISM	GOs from InterProScan
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0071949	FAD binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016170	Cytok_DH_C_sf	Gene3D	242	481
IPR036318	FAD-bd_PCMH-like_sf	SUPERFAMILY	43	238
IPR015345	Cytokinin_DH_FAD/cytokin-bd	Pfam	240	490
IPR006093	Oxy_OxRdtase_FAD_BS	ProSitePatterns	67	102
IPR016164	FAD-linked_Oxase-like_C	SUPERFAMILY	240	490
IPR016167	FAD-bd_PCMH_sub1	Gene3D	48	489
IPR006094	Oxid_FAD_bind_N	Pfam	67	208
IPR016166	FAD-bd_PCMH	ProSiteProfiles	63	239
IPR016169	FAD-bd_PCMH_sub2	Gene3D	118	241
IPR016164	FAD-linked_Oxase-like_C	SUPERFAMILY	240	490
IPR015345	Cytokinin_DH_FAD/cytokin-bd	Pfam	240	489
IPR006094	Oxid_FAD_bind_N	Pfam	67	208
IPR016167	FAD-bd_PCMH_sub1	Gene3D	48	489
IPR006093	Oxy_OxRdtase_FAD_BS	ProSitePatterns	67	102
IPR016170	Cytok_DH_C_sf	Gene3D	242	481
IPR016169	FAD-bd_PCMH_sub2	Gene3D	118	241
IPR016166	FAD-bd_PCMH	ProSiteProfiles	63	239
IPR036318	FAD-bd_PCMH-like_sf	SUPERFAMILY	43	238

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
AA7	458	495	2.9e-28	58	253

External Links

No external refs found!

Zm00001d053579_T001

Expression Profile

Co-expression Networks

Functional Annotation