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  5. Zm00001d053640_T001

Zm00001d053640_T001


Description : Mitochondrial substrate carrier family protein


Gene families : OG_01_0003332 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003332_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d053640_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d053640_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_307
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_143


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002048 EF_hand_dom Pfam 147 203
IPR002048 EF_hand_dom SMART 116 144
IPR002048 EF_hand_dom SMART 183 211
IPR002048 EF_hand_dom SMART 147 175
IPR002048 EF_hand_dom ProSiteProfiles 112 147
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 192 204
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 125 137
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 341 426
IPR002067 Mit_carrier PRINTS 304 324
IPR002067 Mit_carrier PRINTS 446 468
IPR002067 Mit_carrier PRINTS 251 264
IPR002067 Mit_carrier PRINTS 399 417
IPR002067 Mit_carrier PRINTS 356 374
IPR002067 Mit_carrier PRINTS 264 278
IPR002048 EF_hand_dom CDD 147 208
IPR023395 Mt_carrier_dom_sf SUPERFAMILY 244 521
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 246 329
IPR002048 EF_hand_dom ProSiteProfiles 179 214
IPR002048 EF_hand_dom Pfam 117 142
IPR018108 Mitochondrial_sb/sol_carrier Pfam 245 333
IPR018108 Mitochondrial_sb/sol_carrier Pfam 344 427
IPR018108 Mitochondrial_sb/sol_carrier Pfam 439 526
IPR023395 Mt_carrier_dom_sf Gene3D 241 527
IPR011992 EF-hand-dom_pair SUPERFAMILY 58 243
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 437 525
IPR002048 EF_hand_dom ProSiteProfiles 179 214
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 246 329
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 125 137
IPR023395 Mt_carrier_dom_sf Gene3D 241 527
IPR023395 Mt_carrier_dom_sf SUPERFAMILY 244 521
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 437 525
IPR011992 EF-hand-dom_pair SUPERFAMILY 58 243
IPR002067 Mit_carrier PRINTS 304 324
IPR002067 Mit_carrier PRINTS 446 468
IPR002067 Mit_carrier PRINTS 251 264
IPR002067 Mit_carrier PRINTS 399 417
IPR002067 Mit_carrier PRINTS 356 374
IPR002067 Mit_carrier PRINTS 264 278
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 192 204
IPR002048 EF_hand_dom Pfam 147 206
IPR002048 EF_hand_dom SMART 116 144
IPR002048 EF_hand_dom SMART 183 211
IPR002048 EF_hand_dom SMART 147 175
IPR002048 EF_hand_dom Pfam 117 143
IPR018108 Mitochondrial_sb/sol_carrier Pfam 341 427
IPR018108 Mitochondrial_sb/sol_carrier Pfam 438 526
IPR018108 Mitochondrial_sb/sol_carrier Pfam 245 333
IPR002048 EF_hand_dom CDD 147 208
IPR002048 EF_hand_dom ProSiteProfiles 112 147
IPR018108 Mitochondrial_sb/sol_carrier ProSiteProfiles 341 426

No CAZYmes available for this sequence

No external refs found!