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  5. Zm00001d053737_T001

Zm00001d053737_T001


Description : sucrose synthase 5


Gene families : OG_01_0027951 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0027951_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d053737_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d053737_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_97
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_29


Type GO Term Name Evidence Source
BP GO:0005985 sucrose metabolic process ISM GOs from InterProScan
MF GO:0016157 sucrose synthase activity ISM GOs from InterProScan
MF GO:0016757 glycosyltransferase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000368 Sucrose_synth Pfam 199 369
IPR012820 Sucrose_synthase_pln/cyn PANTHER 199 367
IPR001841 Znf_RING Pfam 132 175
IPR013083 Znf_RING/FYVE/PHD Gene3D 97 179
IPR001841 Znf_RING ProSiteProfiles 133 175
IPR001841 Znf_RING SMART 133 174
IPR001296 Glyco_trans_1 Pfam 373 464
IPR013083 Znf_RING/FYVE/PHD Gene3D 97 179
IPR012820 Sucrose_synthase_pln/cyn PANTHER 173 367
IPR000368 Sucrose_synth Pfam 199 369
IPR012820 Sucrose_synthase_pln/cyn PANTHER 368 474
IPR012820 Sucrose_synthase_pln/cyn PANTHER 43 167
IPR001841 Znf_RING ProSiteProfiles 133 175
IPR001841 Znf_RING SMART 133 174
IPR001841 Znf_RING Pfam 132 175
HMM Family HMM Length Query Length e-Value Query Start Query End
GT4 160 478 6e-16 371 474
No external refs found!