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  5. Zm00001d053861_T005

Zm00001d053861_T005


Description : Small GTP-binding protein


Gene families : OG_01_0004243 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004243_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d053861_T005
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d053861_T005
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_192
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_162


Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity ISM GOs from InterProScan
MF GO:0005525 GTP binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000640 EFG_V-like SMART 470 558
IPR027518 GUFP Hamap 69 669
IPR000795 T_Tr_GTP-bd_dom Pfam 76 254
IPR035647 EFG_III/V SUPERFAMILY 471 566
IPR027417 P-loop_NTPase Gene3D 74 257
IPR000640 EFG_V-like Pfam 471 557
IPR035647 EFG_III/V SUPERFAMILY 364 442
IPR000795 T_Tr_GTP-bd_dom ProSiteProfiles 75 256
IPR004161 EFTu-like_2 Pfam 277 347
IPR005225 Small_GTP-bd_dom NCBIfam 78 247
IPR006297 EF-4 NCBIfam 76 667
IPR027417 P-loop_NTPase SUPERFAMILY 72 273
IPR038363 LepA_C_sf Gene3D 552 626
IPR000795 T_Tr_GTP-bd_dom PRINTS 146 156
IPR000795 T_Tr_GTP-bd_dom PRINTS 162 173
IPR000795 T_Tr_GTP-bd_dom PRINTS 122 130
IPR000795 T_Tr_GTP-bd_dom PRINTS 79 92
IPR000795 T_Tr_GTP-bd_dom PRINTS 198 207
IPR031157 G_TR_CS ProSitePatterns 115 130
IPR006297 EF-4 Hamap 72 670
IPR035654 LepA_IV CDD 473 552
IPR009000 Transl_B-barrel_sf SUPERFAMILY 237 360
IPR013842 LepA_CTD Pfam 560 666
IPR006297 EF-4 PANTHER 60 666
IPR035647 EFG_III/V SUPERFAMILY 471 566
IPR000640 EFG_V-like SMART 470 558
IPR035647 EFG_III/V SUPERFAMILY 364 442
IPR000795 T_Tr_GTP-bd_dom Pfam 76 253
IPR000795 T_Tr_GTP-bd_dom PRINTS 146 156
IPR000795 T_Tr_GTP-bd_dom PRINTS 162 173
IPR000795 T_Tr_GTP-bd_dom PRINTS 122 130
IPR000795 T_Tr_GTP-bd_dom PRINTS 79 92
IPR000795 T_Tr_GTP-bd_dom PRINTS 198 207
IPR031157 G_TR_CS ProSitePatterns 115 130
IPR006297 EF-4 Hamap 72 670
IPR009000 Transl_B-barrel_sf SUPERFAMILY 237 360
IPR035654 LepA_IV CDD 473 552
IPR005225 Small_GTP-bd_dom TIGRFAM 78 247
IPR000640 EFG_V-like Pfam 471 557
IPR006297 EF-4 PANTHER 65 666
IPR013842 LepA_CTD Pfam 560 666
IPR004161 EFTu-like_2 Pfam 277 347
IPR000795 T_Tr_GTP-bd_dom ProSiteProfiles 75 256
IPR006297 EF-4 TIGRFAM 76 667
IPR027417 P-loop_NTPase Gene3D 74 257
IPR027417 P-loop_NTPase SUPERFAMILY 72 273
IPR027518 GUFP Hamap 69 669
IPR038363 LepA_C_sf Gene3D 552 626

No CAZYmes available for this sequence

No external refs found!